Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811784.1_cds_XP_016496863.1_11044
CDS Infomation

[gene=LOC107815748] [db_xref=GeneID:107815748] [protein=pentatricopeptide repeat-containing protein At1g33350-like] [protein_id=XP_016496863.1] [location=complement(207981..209561)] [gbkey=CDS]
Sequence

ATGCTACTCGGACAAAATCTATATCAAGACATCCTACTTAATCTAGATAAATGCAAGTGT
CTTGCTCTACTCAAGCAATTGCAAGGCCATCTCATTACCACTGGTCATGGCCAAACGCAG
CTTTATGCGTTCAAGCTTGTTCGTTTCTGCACCATCACTCTCTCAAACCTCCATTATGCT
CGCTTAATCTTCAATTACCTTAATTTTCCCAATGTTTACCTTTATACTGCGATGATTACT
TCATACACTTCCGTTCAAGATCATACATCATCTCTTTTGTTATACCGTGAAATGGTTCGT
AATGGCTTGTCAAGGCCTAACCATTTTGTATTCCCTATAATCTTAAAGTCTTTCCCTGAA
GTTATAAAGTCTTATGGGATTGAGATGGCGCATACCCATATTGACAAAATGGGTTTTGGA
AAATACCCTGTTGTTCAGACAGCTCTATTGGATGTTTATTCAAGGTCTTCGTCTGATATT
AGAGTTGCACGGCAACTGTTTGATGAAATTACTGACAGGAATGTGGTTTCATGGACTGCA
ATGATATCGGGATATACTAGAGTTGGGCAAATGGGGGATGCTATTTTGCTTTTTGAAGAA
GTTCCTCAGTGTGTAAGAGACACTCCCTCTTGGAATTCCATAATTGCGGGGTGTACACAA
AATGGGCTGTTTTCTGAGGCCATTTCATTTTTAAGAAGAATGATAGTTGAGGAAGGTATG
GTTCAATGGAATAAGCCTAATGATGTTACATTTGCGTGTGTACTTGCTGCTTGTGGGCAT
ACCGGAATGCTTCAGCTCGGAGAATGCATTCATGGGTATGTGTATCGGAATAGTGTTCAT
TTGAATTCGCTTACTTTGAATGCTCTCATTGATATGTATGGAAAATGCGGGAGTTTGAAA
GAAGCAAGATATCTTTTTGATAAGGCTAATAGAGGGAGTTTGACATGTTGGAATTCTATG
ATCAATTGTTTGGCCCTTCAAGGTCATTGGGAAGGTGCTATTGGAGTTTTCAAAGATATG
TTGCAACATGGCGATGATTTAAAACCTGATTCAGTGACTTTTATTGGCTTGTTGAATGCT
TGTACTCATGGAGGGTTGGTTCAAGAGGGGCTTAGTTATTATGACTTAATGACTAGGGTA
TACGGAATTAACCCTGAAATTGAACATTATGGGTGTTTAGTTGATCTTCATGGACGAGCA
GGTCGGTTTGAGGAAATTATGGAAATTGTTAGAAAGATGCACATAGCTCCAGATGCAGTT
ATATGGGGTACCTTGCTTAACGGCTGCAAGATTCATGGGCGTATTGACTTGGCTGAATAT
GCACTTAAAAACTTGATTAGTATTGATCCAAATAATGGTAGTTATTACTCTATGCTGGCT
AATTTATATGGGGAGTTGGGGAAGTGGGAAGAGGTTCGAAAAATAAGGAAGATCCTAAAT
CAGCAGAATGCTTATAAAGCTCGTGGTTGCAGTTGGATTGAGCTTGATAACCAAGTTCAT
CAGTTCTATTCAGTAGACAAATCTCACCCTAGAATGGAAGAGATATACTCAATTTTGGAA
TGTTTGGTTGATGCGCATTAG

Peptide Sequence

PEP ID

XP_016496863.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g33350-like [Nicotiana tabacum]
Sequence

MLLGQNLYQDILLNLDKCKCLALLKQLQGHLITTGHGQTQLYAFKLVRFCTITLSNLHYA
RLIFNYLNFPNVYLYTAMITSYTSVQDHTSSLLLYREMVRNGLSRPNHFVFPIILKSFPE
VIKSYGIEMAHTHIDKMGFGKYPVVQTALLDVYSRSSSDIRVARQLFDEITDRNVVSWTA
MISGYTRVGQMGDAILLFEEVPQCVRDTPSWNSIIAGCTQNGLFSEAISFLRRMIVEEGM
VQWNKPNDVTFACVLAACGHTGMLQLGECIHGYVYRNSVHLNSLTLNALIDMYGKCGSLK
EARYLFDKANRGSLTCWNSMINCLALQGHWEGAIGVFKDMLQHGDDLKPDSVTFIGLLNA
CTHGGLVQEGLSYYDLMTRVYGINPEIEHYGCLVDLHGRAGRFEEIMEIVRKMHIAPDAV
IWGTLLNGCKIHGRIDLAEYALKNLISIDPNNGSYYSMLANLYGELGKWEEVRKIRKILN
QQNAYKARGCSWIELDNQVHQFYSVDKSHPRMEEIYSILECLVDAH

Transcript Sequence

Gene sequence data has not been registered.